STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpC1ABC transporter ATPase; Belongs to the ABC transporter superfamily. (364 aa)    
Predicted Functional Partners:
malE1
Maltose/maltodextrin ABC transporter2C substrate binding periplasmic protein MalE; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.
 
 0.998
ganQ
Putative sugar ABC transporter permease.
 0.998
ganP
Putative sugar ABC transporter permease/periplasmic sugar-binding protein.
 
 0.996
araQ
L-arabinose transport system permease protein AraQ.
 
 
 0.956
thuG
Putative sugar ABC transporter permease.
 
 0.954
thuF
Putative sugar ABC transporter permease.
 
 
 0.953
yurN
Putative ABC transporter permease protein yurN.
 
 
 0.953
ugpC
Putative sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.905
malK
Putative sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
  
  
 
0.905
oppD
Oligopeptide/dipeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
    
0.904
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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