STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE03505.1Putative lipoprotein. (624 aa)    
Predicted Functional Partners:
yfiO
Putative competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.512
AFE04291.1
Surface antigen variable number repeat protein.
  
 
 0.425
AFE04650.1
Hypothetical protein.
  
 
 0.425
yaeT
OMP85 family outer membrane protein.
  
 
 0.425
AFE05993.1
OMP85 family outer membrane protein.
  
 
 0.425
yaeT1
OMP85 family outer membrane protein.
  
 
 0.425
AFE06999.1
Hypothetical protein.
  
 
 0.425
yaeT2
OMP85 family outer membrane protein.
  
 
 0.425
mdtA1
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.420
AFE03504.1
Hypothetical protein.
       0.413
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
Server load: low (20%) [HD]