STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
qorAZinc-binding dehydrogenase family oxidoreductase. (328 aa)    
Predicted Functional Partners:
AFE03668.1
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase.
  
   0.691
yogA
Zinc-binding dehydrogenase family oxidoreductase.
  
     0.610
yogA1
Zinc-binding dehydrogenase family oxidoreductase.
  
     0.595
bacA1
Non-ribosomal peptide synthetase/polyketide synthase.
  
 
 0.587
AFE05322.1
Long-chain-fatty-acid--CoA ligase.
  
 
 0.557
AFE05697.1
Long-chain-fatty-acid--CoA ligase.
  
 
 0.553
bacA
Non-ribosomal peptide synthetase.
  
 
 0.539
qor
Alcohol dehydrogenase, zinc-containing; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.
  
     0.490
pcbAB
Long-chain-fatty-acid--CoA ligase.
  
  
 0.463
lgrC
Linear gramicidin synthase subunit C.
  
 
 0.459
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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