STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE03879.1Hypothetical protein. (1258 aa)    
Predicted Functional Partners:
aglZ
Adventurous gliding motility protein AglZ.
 
 
 
 0.840
AFE04558.1
TPR repeat-containing protein.
 
   
 0.789
agmK
Adventurous gliding motility protein AgmK.
 
   
 0.783
AFE07270.1
TPR repeat-containing protein.
  
 
   0.780
agmX
Adventurous gliding motility protein AgmX.
  
     0.774
AFE05866.1
Hypothetical protein.
  
     0.774
aglU
Adventurous gliding motility protein AglU.
  
     0.774
AFE04597.1
Hypothetical protein.
  
     0.773
AFE04718.1
Hypothetical protein.
  
     0.773
AFE05955.1
TPR repeat-containing protein.
  
     0.773
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.