STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE03913.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
AFE07552.1
Hypothetical protein.
  
     0.760
AFE04722.1
Hypothetical protein.
  
    0.718
AFE07567.1
Hypothetical protein.
  
    0.680
AFE07270.1
TPR repeat-containing protein.
  
     0.655
AFE05276.1
Hypothetical protein.
  
     0.652
AFE05163.1
Hypothetical protein.
  
     0.647
AFE03802.1
FG-GAP repeat-containing protein.
  
     0.641
AFE03914.1
Hypothetical protein.
       0.631
AFE06489.1
Hypothetical protein.
  
     0.608
pbpA
Putative penicillin-binding protein.
  
     0.605
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.