STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE04182.1LuxR family transcriptional regulator. (356 aa)    
Predicted Functional Partners:
barA2
Sensory box histidine kinase/response regulator.
   
 
 0.738
gacS3
Sensor histidine kinase/response regulator.
  
 
 0.649
AFE04181.1
LuxR family transcriptional regulator.
  
 
0.640
luxQ1
Autoinducer 2 sensor kinase/phosphatase.
 
 
 0.573
degS
Sensor histidine kinase.
 
 
 0.561
rpfC1
Sensory/regulatory protein RpfC.
  
 
 0.557
garR
Coenzyme F420-dependent NADP oxidoreductase.
  
     0.556
AFE04183.1
LuxR family transcriptional regulator.
 
   
0.542
zraS
Sensor protein.
  
 
 0.532
arcB1
Aerobic respiration control sensor protein.
 
 
 0.531
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.