STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE04307.1Hypothetical protein. (138 aa)    
Predicted Functional Partners:
AFE04305.1
ArsR family transcriptional regulator.
 
     0.804
AFE04306.1
Activator of Hsp90 ATPase 1 family protein.
 
     0.796
AFE04308.1
Hypothetical protein.
       0.782
AFE05059.1
Dyp-type peroxidase family protein.
  
     0.629
AFE04309.1
Hypothetical protein.
       0.610
AFE04310.1
Hypothetical protein.
       0.594
AFE04683.1
Hypothetical protein.
  
  
 0.559
AFE06457.1
Hypothetical protein.
  
     0.538
AFE04339.1
Hypothetical protein.
  
     0.532
AFE04447.1
Hypothetical protein.
  
     0.520
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.