STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ydjCYdjC-like protein. (278 aa)    
Predicted Functional Partners:
pgaC
Group 2 glycosyl transferase.
  
    0.786
ydjC1
YdjC-like protein.
  
     0.770
pleD1
Response regulator/GGDEF domain-containing protein.
       0.533
arnT1
Polymyxin resistance protein ArnT2C undecaprenyl phosphate-alpha-L-Ara4N transferase.
 
  
 0.501
arnT
Dolichyl-phosphate-mannose-protein mannosyltransferase family protein.
 
  
 0.481
AFE06632.1
Hypothetical protein.
  
     0.472
AFE06092.1
Hypothetical protein.
  
     0.471
AFE06170.1
Hypothetical protein; Belongs to the multicopper oxidase YfiH/RL5 family.
  
     0.456
ugcG
Glycosyltransferase.
 
   
 0.453
cas
Putative squalene--hopene cyclase.
 
     0.451
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.