STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ybhRPutative daunorubicin resistance ABC transporter permease. (290 aa)    
Predicted Functional Partners:
nodI
Putative daunorubicin resistance ABC transporter ATP-binding subunit.
  
 0.961
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.
       0.659
yadG
ABC transporter ATP-binding protein.
  
 0.618
AFE04559.1
Putative lipoprotein.
 
     0.610
yhcH
ABC transporter ATP-binding protein.
  
 0.514
AFE03347.1
Hypothetical protein.
  
  
 0.509
AFE05928.1
Hypothetical protein.
  
  
 0.509
AFE06512.1
YcaO-like fatty acid binding domain-containing protein.
  
  
 0.509
mhqN
Putative NAD(P)H nitroreductase mhqN.
  
  
 0.496
spaB
Lanthionine biosynthesis protein LanB.
  
  
 0.496
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.