STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE04650.1Hypothetical protein. (392 aa)    
Predicted Functional Partners:
AFE03461.1
Hypothetical protein.
  
     0.750
AFE07125.1
Glycoside hydrolase; Belongs to the glycosyl hydrolase 43 family.
  
     0.723
AFE07414.1
Cysteine-rich repeat protein.
  
     0.721
AFE05974.1
Hypothetical protein.
  
     0.710
AFE04482.1
PDZ domain-containing protein.
  
    0.678
AFE06269.1
Hypothetical protein.
  
   
 0.672
AFE06266.1
Lanthionine synthetase C family protein.
  
     0.670
AFE05662.1
Hypothetical protein.
  
     0.669
AFE05666.1
Hypothetical protein.
  
     0.662
yfiO
Putative competence lipoprotein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
 
 0.650
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.