STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE04736.1Hypothetical protein. (388 aa)    
Predicted Functional Partners:
AFE04250.1
Hypothetical protein.
  
     0.754
AFE05003.1
Hypothetical protein.
  
     0.724
AFE04271.1
Hypothetical protein.
  
     0.569
lipB1
Lipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.
  
 
 0.541
mscS
MscS mechanosensitive ion channel.
       0.517
AFE06858.1
Hypothetical protein.
  
     0.472
AFE03214.1
Hypothetical protein.
  
     0.471
zraS9
Sensor protein.
  
     0.470
AFE07346.1
Hypothetical protein.
  
     0.463
kdpD1
Serine/threonine protein kinase.
  
     0.410
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.