STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE04870.1Putative phage tail protein. (924 aa)    
Predicted Functional Partners:
AFE04872.1
Baseplate assembly protein W.
 
 
 0.990
AFE04879.1
Phage tail sheath protein FI.
 
 
 0.987
AFE04875.1
Hypothetical protein.
 
  
 0.986
AFE04881.1
Putative phage tail sheath protein.
 
 
 0.984
AFE04871.1
Hypothetical protein.
 
    0.960
AFE04877.1
Hypothetical protein.
 
  
 0.957
AFE04874.1
Hypothetical protein.
 
     0.948
AFE04878.1
Hypothetical protein.
 
     0.943
AFE04880.1
Hypothetical protein.
 
     0.943
AFE05115.1
Hypothetical protein.
 
 
 0.940
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.