Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFE04987.1 | AFE04988.1 | COCOR_03035 | COCOR_03037 | Hypothetical protein. | Hypothetical protein. | 0.402 |
| AFE04987.1 | argS | COCOR_03035 | COCOR_03033 | Hypothetical protein. | arginyl-tRNA synthetase. | 0.422 |
| AFE04987.1 | dnaJ1 | COCOR_03035 | COCOR_03036 | Hypothetical protein. | Putative chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions betwee [...] | 0.599 |
| AFE04987.1 | efp | COCOR_03035 | COCOR_06269 | Hypothetical protein. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.405 |
| AFE04987.1 | rimI | COCOR_03035 | COCOR_03038 | Hypothetical protein. | Ribosomal-protein-alanine acetyltransferase. | 0.412 |
| AFE04987.1 | yycG1 | COCOR_03035 | COCOR_03034 | Hypothetical protein. | Sensor histidine kinase/response regulator. | 0.536 |
| AFE04988.1 | AFE04987.1 | COCOR_03037 | COCOR_03035 | Hypothetical protein. | Hypothetical protein. | 0.402 |
| AFE04988.1 | dnaJ1 | COCOR_03037 | COCOR_03036 | Hypothetical protein. | Putative chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions betwee [...] | 0.550 |
| AFE04988.1 | rimI | COCOR_03037 | COCOR_03038 | Hypothetical protein. | Ribosomal-protein-alanine acetyltransferase. | 0.788 |
| argS | AFE04987.1 | COCOR_03033 | COCOR_03035 | arginyl-tRNA synthetase. | Hypothetical protein. | 0.422 |
| argS | efp | COCOR_03033 | COCOR_06269 | arginyl-tRNA synthetase. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.630 |
| argS | yycG1 | COCOR_03033 | COCOR_03034 | arginyl-tRNA synthetase. | Sensor histidine kinase/response regulator. | 0.576 |
| dnaJ1 | AFE04987.1 | COCOR_03036 | COCOR_03035 | Putative chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions betwee [...] | Hypothetical protein. | 0.599 |
| dnaJ1 | AFE04988.1 | COCOR_03036 | COCOR_03037 | Putative chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions betwee [...] | Hypothetical protein. | 0.550 |
| dnaJ1 | rimI | COCOR_03036 | COCOR_03038 | Putative chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions betwee [...] | Ribosomal-protein-alanine acetyltransferase. | 0.578 |
| dnaJ1 | yycG1 | COCOR_03036 | COCOR_03034 | Putative chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions betwee [...] | Sensor histidine kinase/response regulator. | 0.475 |
| efp | AFE04987.1 | COCOR_06269 | COCOR_03035 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Hypothetical protein. | 0.405 |
| efp | argS | COCOR_06269 | COCOR_03033 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | arginyl-tRNA synthetase. | 0.630 |
| rimI | AFE04987.1 | COCOR_03038 | COCOR_03035 | Ribosomal-protein-alanine acetyltransferase. | Hypothetical protein. | 0.412 |
| rimI | AFE04988.1 | COCOR_03038 | COCOR_03037 | Ribosomal-protein-alanine acetyltransferase. | Hypothetical protein. | 0.788 |
page 1 of 2