STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE05409.1ABC transporter periplasmic substrate-binding protein. (358 aa)    
Predicted Functional Partners:
fbpB1
ABC transporter permease.
 
 
 0.997
potA2
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.983
potA
Iron ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.934
AFE05410.1
Hypothetical protein.
       0.773
glp
Glycerol 3-phosphate permease.
  
  
 0.582
copF
Copper-translocating P-type ATPase.
  
  
 0.557
ybfB
Major facilitator family transporter.
  
  
 0.544
dgoT
Major facilitator family transporter.
  
  
 0.544
yajO5
Oxidoreductase.
       0.534
ywbL
FTR1 family cytochrome c family protein/iron permease.
   
  
 0.531
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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