STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsAArsenical pump-driving ATPase; Anion-transporting ATPase; Belongs to the arsA ATPase family. (660 aa)    
Predicted Functional Partners:
gvpF
GvpL/GvpF family gas vesicle protein.
 
     0.607
yieN1
AAA family ATPase.
 
     0.497
AFE05955.1
TPR repeat-containing protein.
  
 
  0.488
AFE07887.1
Polysaccharide biosynthesis protein.
  
     0.473
AFE04404.1
Hypothetical protein.
  
     0.460
AFE06223.1
Putative adventurous gliding motility protein.
  
 
  0.456
alkB
Fatty acid desaturase.
  
     0.444
AFE05463.1
Hypothetical protein.
  
     0.415
aglZ
Adventurous gliding motility protein AglZ.
  
     0.414
agmK
Adventurous gliding motility protein AgmK.
  
 
  0.408
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.