Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFE04606.1 | gntX | COCOR_02338 | COCOR_01148 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | Phosphoribosyltransferase. | 0.476 |
| AFE04606.1 | xerC | COCOR_02338 | COCOR_03386 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.511 |
| AFE04606.1 | xerC1 | COCOR_02338 | COCOR_05048 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | Tyrosine recombinase. | 0.511 |
| AFE04606.1 | xerD1 | COCOR_02338 | COCOR_04007 | Hypothetical protein; Belongs to the SOS response-associated peptidase family. | Tyrosine recombinase; Belongs to the 'phage' integrase family. | 0.535 |
| AFE05558.1 | AFE05559.1 | COCOR_04006 | COCOR_04008 | Metallo-beta-lactamase family protein. | Hypothetical protein. | 0.773 |
| AFE05558.1 | nifA | COCOR_04006 | COCOR_04005 | Metallo-beta-lactamase family protein. | Sigma-54 dependent transcription regulator. | 0.584 |
| AFE05558.1 | xerD1 | COCOR_04006 | COCOR_04007 | Metallo-beta-lactamase family protein. | Tyrosine recombinase; Belongs to the 'phage' integrase family. | 0.773 |
| AFE05559.1 | AFE05558.1 | COCOR_04008 | COCOR_04006 | Hypothetical protein. | Metallo-beta-lactamase family protein. | 0.773 |
| AFE05559.1 | nifA | COCOR_04008 | COCOR_04005 | Hypothetical protein. | Sigma-54 dependent transcription regulator. | 0.572 |
| AFE05559.1 | xerD1 | COCOR_04008 | COCOR_04007 | Hypothetical protein. | Tyrosine recombinase; Belongs to the 'phage' integrase family. | 0.796 |
| apt | atoS7 | COCOR_02215 | COCOR_06377 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Sensory box histidine kinase. | 0.724 |
| apt | gntX | COCOR_02215 | COCOR_01148 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Phosphoribosyltransferase. | 0.680 |
| apt | tyrA | COCOR_02215 | COCOR_05897 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Prephenate dehydrogenase/chorismate mutase. | 0.730 |
| apt | xerC | COCOR_02215 | COCOR_03386 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.520 |
| apt | xerC1 | COCOR_02215 | COCOR_05048 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Tyrosine recombinase. | 0.520 |
| apt | xerD1 | COCOR_02215 | COCOR_04007 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Tyrosine recombinase; Belongs to the 'phage' integrase family. | 0.520 |
| atoS7 | apt | COCOR_06377 | COCOR_02215 | Sensory box histidine kinase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.724 |
| atoS7 | gntX | COCOR_06377 | COCOR_01148 | Sensory box histidine kinase. | Phosphoribosyltransferase. | 0.577 |
| atoS7 | tyrA | COCOR_06377 | COCOR_05897 | Sensory box histidine kinase. | Prephenate dehydrogenase/chorismate mutase. | 0.618 |
| atoS7 | xerC | COCOR_06377 | COCOR_03386 | Sensory box histidine kinase. | Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. | 0.515 |
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