STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copBCopper tolerance protein. (450 aa)    
Predicted Functional Partners:
copA
Multicopper oxidase domain-containing protein.
 
   
 0.954
czcC
Outer membrane efflux protein.
 
     0.717
AFE05265.1
HlyD family secretion protein.
 
 
 0.620
czcB1
RND family heavy metal efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.595
AFE06032.1
Kelch motif-containing protein.
  
     0.582
AFE03371.1
RND family efflux transporter MFP subunit.
  
 
 0.541
emrA
Membrane fusion component of tripartite multidrug resistance system.
  
 
 0.541
yhiI
Membrane-fusion protein.
  
 
 0.541
emrA1
Membrane fusion component of tripartite multidrug resistance system.
  
 
 0.541
ydhJ
Membrane fusion component of tripartite multidrug resistance system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.541
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.