STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcaCResponse regulator. (129 aa)    
Predicted Functional Partners:
divL
Sensor protein.
 
 
 0.858
walK2
Periplasmic sensor signal transduction histidine kinase.
 
 
 0.851
srrB6
Sensory box histidine kinase.
 
 
 0.842
kinB1
Sensory box histidine kinase.
 
   0.840
barA
Sensor histidine kinase.
 
 
 0.839
sasA1
Two-component sensor histidine kinase.
 
 
 0.839
bphP4
Sensory box histidine kinase.
 
   0.834
phoR5
Sensor histidine kinase.
 
 
 0.831
srrB1
Sensor protein.
 
 
 0.827
sasS
Developmental sensor histidine kinase SasS.
 
 
 0.827
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.