STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptrBS9A family peptidase. (726 aa)    
Predicted Functional Partners:
dacC
Putative D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase.
       0.648
AFE06307.1
Acylamino-acid-releasing enzyme.
  
  
 0.620
ptpA2
Prolyl tripeptidyl peptidase.
  
   
 0.591
ptpA1
S9B family peptidase.
  
   
 0.573
AFE06098.1
Hypothetical protein.
       0.538
ywaD1
Peptidase M28 family protein.
  
     0.522
iap
M28 family peptidase.
  
     0.505
AFE05438.1
Hypothetical protein.
  
     0.490
AFE03260.1
M28D family peptidase.
  
     0.489
ptpA
S9B family peptidase.
  
   
 0.487
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.