STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE06101.1Hypothetical protein. (331 aa)    
Predicted Functional Partners:
AFE07270.1
TPR repeat-containing protein.
  
     0.757
AFE05276.1
Hypothetical protein.
  
     0.738
AFE03551.1
Hypothetical protein.
  
     0.730
ynbD
PAP2 family protein.
  
     0.730
AFE06489.1
Hypothetical protein.
  
     0.720
AFE06937.1
Hypothetical protein.
  
     0.714
AFE05163.1
Hypothetical protein.
  
     0.704
AFE06465.1
Hypothetical protein.
  
     0.696
AFE06876.1
Ig-like domain-containing protein.
  
     0.690
AFE03651.1
Hypothetical protein.
 
     0.688
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.