STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfa1Cyclopropane-fatty-acyl-phospholipid synthase. (296 aa)    
Predicted Functional Partners:
ppsB
Malonyl CoA-acyl carrier protein transacylase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
     
 0.775
AFE06197.1
Acyl carrier protein.
     
 0.775
AFE06198.1
Fatty acid desaturase.
 
     0.680
AFE06199.1
Fatty acid desaturase.
 
     0.604
thiE
Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.
     
 0.597
nodC
Group 2 glycosyl transferase.
     
 0.595
p20
Acetyltransferase.
     
 0.590
AFE06196.1
Hypothetical protein.
     
 0.589
fba2
Fructose-bisphosphate aldolase.
   
    0.512
bacA1
Non-ribosomal peptide synthetase/polyketide synthase.
     
 0.495
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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