STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE06258.1Transposase. (158 aa)    
Predicted Functional Partners:
AFE05811.1
Transposase, is4-like protein.
  
     0.771
AFE04376.1
Transposase.
  
     0.729
AFE03521.1
Insertion element IS402 uncharacterized 16.2 kDa protein.
  
     0.725
AFE04098.1
Insertion element IS402 uncharacterized 16.2 kDa protein.
  
     0.725
AFE07607.1
Insertion element IS402 uncharacterized 16.2 kDa protein.
  
     0.725
AFE07681.1
Transposase.
  
     0.725
AFE05824.1
Insertion element IS402 uncharacterized 16.2 kDa protein.
  
     0.710
AFE05823.1
Transposase, is4-like protein.
 
     0.680
AFE04365.1
Transposase.
  
     0.601
AFE04097.1
Putative transposase for insertion sequence element IS701.
  
     0.593
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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