STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE06599.1M12A family peptidase. (874 aa)    
Predicted Functional Partners:
AFE06675.1
Peptidase.
  
     0.640
carF
Carotenoid synthesis regulator CarF.
  
     0.622
AFE03262.1
FG-GAP repeat-containing protein.
  
     0.574
AFE03402.1
S1 family peptidase.
  
     0.539
AFE06910.1
Flagellar hook-length control protein.
  
 
   0.527
hipA
HipA-like protein.
       0.524
AFE06598.1
Hypothetical protein.
       0.524
AFE03261.1
FG-GAP repeat-containing protein.
  
     0.515
AFE04074.1
Collagen.
  
     0.501
tlp1
S1A family peptidase.
  
     0.478
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.