STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE06926.1Hypothetical protein. (207 aa)    
Predicted Functional Partners:
AFE06927.1
Hypothetical protein.
       0.642
gst4
Glutathione S-transferase.
  
    0.506
AFE05722.1
Hypothetical protein.
  
     0.452
AFE03811.1
Putative pilus biogenesis operon protein.
  
     0.439
AFE03959.1
Hypothetical protein.
  
     0.439
AFE05728.1
Hypothetical protein.
  
     0.432
AFE04692.1
Hypothetical protein.
  
     0.430
AFE04495.1
Putative lipoprotein.
  
     0.428
AFE07547.1
Hypothetical protein.
  
     0.427
AFE04857.1
Hypothetical protein.
  
     0.423
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.