STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE07073.1Amidohydrolase domain-containing protein. (426 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
  
  
 0.715
AFE03319.1
Putative lipoprotein.
 
     0.660
hutH
Histidine ammonia-lyase.
  
  
 0.601
hutH1
Histidine ammonia-lyase.
  
  
 0.601
AFE04659.1
Xaa-Pro aminopeptidase family enzyme.
 
     0.594
speB
Putative agmatinase; Belongs to the arginase family.
  
  
 0.550
AFE07072.1
Putative lipoprotein.
       0.517
ytcJ
Putative lipoprotein.
  
     0.437
AFE03628.1
Hypothetical protein.
  
     0.434
gatA2
Amidase.
 
     0.434
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
Server load: low (12%) [HD]