STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoR6Alkaline phosphatase synthesis sensor protein. (836 aa)    
Predicted Functional Partners:
spo0F4
Response regulator.
  
   0.810
cseB
Response regulator.
  
   0.810
mprA2
Response regulator.
  
   0.805
sphR1
Response regulator.
  
   0.805
rcaC
Response regulator.
  
   0.797
phoP
Response regulator.
  
   0.795
rcsC
Response regulator.
  
 
 0.794
yclJ
DNA-binding response regulator.
  
   0.794
phoP3
DNA-binding response regulator PhoP3.
  
   0.793
spo0F5
Response regulator.
  
   0.791
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.