STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE07707.1AAA family ATPase. (514 aa)    
Predicted Functional Partners:
AFE07711.1
Hypothetical protein.
 
     0.867
AFE07709.1
Hypothetical protein.
  
  
 0.784
AFE07708.1
Hypothetical protein.
       0.773
AFE07710.1
Hypothetical protein.
       0.773
AFE06504.1
Hypothetical protein.
  
     0.713
AFE07903.1
Hypothetical protein.
  
     0.704
AFE07731.1
Hypothetical protein.
 
  
 0.693
AFE03811.1
Putative pilus biogenesis operon protein.
  
     0.691
AFE06828.1
Hypothetical protein.
  
     0.686
AFE03935.1
TPR repeat-containing protein.
 
   
 0.679
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.