STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFE07849.1Hypothetical protein; Belongs to the UPF0312 family. (211 aa)    
Predicted Functional Partners:
AFE07848.1
Rieske family iron-sulfur cluster-binding protein.
 
     0.893
AFE07850.1
Hypothetical protein.
       0.737
AFE07791.1
Acetyltransferase.
  
     0.724
AFE03838.1
Hypothetical protein.
  
     0.717
AFE07157.1
Hypothetical protein.
  
     0.714
AFE06498.1
Hypothetical protein.
  
     0.645
AFE07774.1
asmA family protein.
  
     0.640
mdoC
Acyltransferase family protein.
  
     0.612
oar
Protein oar.
  
     0.601
agmK
Adventurous gliding motility protein AgmK.
  
    0.551
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.