STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
poxBThiamine pyrophosphate protein; Belongs to the TPP enzyme family. (597 aa)    
Predicted Functional Partners:
ppsA
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
    
 0.920
poxB1
Pyruvate dehydrogenase; Belongs to the TPP enzyme family.
  
  
 
0.918
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
    
 0.916
pyk1
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.915
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 0.915
pdhB
Pyruvate dehydrogenase subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
  
 
 0.912
pdhA
Pyruvate dehydrogenase complex, E1 component, pyruvate dehydrogenase subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
 
 0.912
alkH
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.909
alkH1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.909
aldB
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 0.909
Your Current Organism:
Corallococcus coralloides
NCBI taxonomy Id: 1144275
Other names: C. coralloides DSM 2259, Corallococcus coralloides ATCC 25202, Corallococcus coralloides DSM 2259, Corallococcus coralloides NBRC 100086, Corallococcus coralloides str. DSM 2259, Corallococcus coralloides strain DSM 2259
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