STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PS3_14608HesB/YadR/YfhF-family protein. (112 aa)    
Predicted Functional Partners:
PS3_13755
HesB/YadR/YfhF-family protein.
  
     0.768
PS3_15781
Hypothetical protein.
  
     0.667
PS3_6498
Integral membrane protein.
  
     0.623
PS3_12420
XRE family transcriptional regulator.
  
     0.562
PS3_11360
Hypothetical protein.
  
     0.559
PS3_11842
Aromatic amino acid aminotransferase.
       0.541
PS3_21906
Hypothetical protein.
  
     0.541
PS3_14590
Hypothetical protein.
  
     0.481
PS3_16408
Hypothetical protein.
  
     0.448
PS3_7158
Immunity protein PlnI.
  
     0.439
Your Current Organism:
Lactobacillus gastricus
NCBI taxonomy Id: 1144300
Other names: L. gastricus PS3, Lactobacillus gastricus PS3, Lactobacillus gastricus str. PS3, Lactobacillus gastricus strain PS3
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.