STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PS3_16624Acyl-CoA hydrolase. (163 aa)    
Predicted Functional Partners:
PS3_2958
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
    
 0.566
PS3_4381
Hypothetical protein.
  
 
 0.536
PS3_6961
Alcohol acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.523
PS3_12656
Pyruvate dehydrogenase complex E2 component.
    
  0.483
PS3_21317
Cell surface hydrolase.
  
 
  0.481
PS3_6960
Enoyl-[acyl-carrier protein] reductase.
   
    0.448
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
    0.446
PS3_6943
Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.404
Your Current Organism:
Lactobacillus gastricus
NCBI taxonomy Id: 1144300
Other names: L. gastricus PS3, Lactobacillus gastricus PS3, Lactobacillus gastricus str. PS3, Lactobacillus gastricus strain PS3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.