STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PS3_21491Hypothetical protein. (272 aa)    
Predicted Functional Partners:
PS3_20023
Oxidoreductase.
  
 
 0.968
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 
 0.791
PS3_6152
Gluconate kinase; Belongs to the FGGY kinase family.
  
 
 0.782
PS3_11833
Glycerol-3-phosphate transporter.
  
    0.775
PS3_6961
Alcohol acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.703
PS3_15364
Hypothetical protein.
  
     0.597
PS3_6943
Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.574
PS3_11865
PTS system mannose-specific IIAB component.
  
 
  0.557
PS3_21033
Transport protein.
 
  
 0.549
PS3_20426
L-ribulose 5-phosphate 4-epimerase.
  
 
 0.538
Your Current Organism:
Lactobacillus gastricus
NCBI taxonomy Id: 1144300
Other names: L. gastricus PS3, Lactobacillus gastricus PS3, Lactobacillus gastricus str. PS3, Lactobacillus gastricus strain PS3
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.