STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PS3_2783Alcohol dehydrogenase. (340 aa)    
Predicted Functional Partners:
PS3_6961
Alcohol acetaldehyde dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.989
PS3_6948
Alcohol dehydrogenase.
  
  
 
0.904
PS3_20415
Benzyl alcohol dehydrogenase.
  
 
0.875
PS3_13220
Putative L-threonine 3-dehydrogenase.
 
0.550
PS3_4374
Putative (R,R)-butanediol dehydrogenase.
 
0.540
PS3_10758
Flavoprotein.
  
   0.531
PS3_6943
Aldehyde Dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.526
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
     
 0.455
PS3_9962
Dehydrogenase.
  
 
 0.450
PS3_22152
dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.434
Your Current Organism:
Lactobacillus gastricus
NCBI taxonomy Id: 1144300
Other names: L. gastricus PS3, Lactobacillus gastricus PS3, Lactobacillus gastricus str. PS3, Lactobacillus gastricus strain PS3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.