STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PS3_3170Triphosphoribosyl-dephospho-CoA synthetase. (473 aa)    
Predicted Functional Partners:
PS3_20955
Putative citrate [pro-3S]-lyase ligase.
  
 0.981
PS3_13907
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.934
PS3_9101
Citrate lyase alpha subunit.
 
  
 0.922
PS3_6387
Triphosphoribosyl-dephospho-CoA synthase.
 
 
0.908
PS3_10154
Hypothetical protein.
       0.768
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
       0.768
PS3_7154
S-adenosyl-L-methionine-dependent methyltransferase.
       0.768
PS3_15786
Potassium transport protein.
       0.762
PS3_9398
Potassium transporter.
       0.762
PS3_10808
Putative hydrolase/acyltransferase.
 
     0.550
Your Current Organism:
Lactobacillus gastricus
NCBI taxonomy Id: 1144300
Other names: L. gastricus PS3, Lactobacillus gastricus PS3, Lactobacillus gastricus str. PS3, Lactobacillus gastricus strain PS3
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.