STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJL29293.1PFAM: Bacterial regulatory proteins, lacI family, family. (339 aa)    
Predicted Functional Partners:
EJL33663.1
Phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme, mobile domain, PEP-utilising enzyme, TIM barrel domain, PTS HPr component phosphorylation site, PEP-utilising enzyme, N-terminal, Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase, Phosphotransferase System HPr (HPr) Family.
 
 
 
 0.961
EJL31857.1
Amino acid adenylation enzyme/thioester reductase family protein; PFAM: Phosphopantetheine attachment site, Thioesterase domain, AMP-binding enzyme; TIGRFAM: amino acid adenylation domain; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 
 0.913
EJL20971.1
PFAM: Conserved region in glutamate synthase, GXGXG motif, Glutamate synthase central domain, Glutamine amidotransferases class-II.
    
 
 0.913
EJL29292.1
Fucose permease; PFAM: Major Facilitator Superfamily.
 
     0.841
EJL35259.1
PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family.
   
 
 0.638
EJL29289.1
PFAM: Glycosyl hydrolase family 3 C terminal domain, Glycosyl hydrolase family 3 N terminal domain.
 
  
  0.621
tal-2
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
   
 
 0.567
guaB
Inosine-5''-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
   0.560
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
   0.560
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
    
   0.560
Your Current Organism:
Novosphingobium sp. AP12
NCBI taxonomy Id: 1144305
Other names: N. sp. AP12
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