STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJK78243.1Membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family; PFAM: Pyrrolo-quinoline quinone coenzyme N-terminus, Pyrrolo-quinoline quinone coenzyme C-terminus, PQQ enzyme repeat; TIGRFAM: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. (797 aa)    
Predicted Functional Partners:
EJK81015.1
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region.
  
  
 0.778
EJK86145.1
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region.
  
  
 0.757
EJK85071.1
Gluconolactonase; PFAM: SMP-30/Gluconolaconase/LRE-like region.
  
  
 0.734
EJK84010.1
PFAM: Glucokinase; TIGRFAM: glucokinase, proteobacterial type; Belongs to the bacterial glucokinase family.
     
 0.632
pgi
PFAM: Phosphoglucose isomerase; Belongs to the GPI family.
     
 0.629
EJK78239.1
PFAM: Protein of unknown function (DUF3325).
       0.496
EJK78240.1
Putative iron-regulated membrane protein.
       0.496
EJK78241.1
Hypothetical protein.
       0.496
EJK78242.1
PFAM: TonB-dependent Receptor Plug Domain, TonB dependent receptor; TIGRFAM: TonB-dependent siderophore receptor.
       0.496
EJK86859.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component alpha subunit; PFAM: Dehydrogenase E1 component.
     
 0.478
Your Current Organism:
Sphingobium sp. AP49
NCBI taxonomy Id: 1144307
Other names: S. sp. AP49
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.