STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUB97202.1KEGG: hypothetical protein. (73 aa)    
Predicted Functional Partners:
EUB97203.1
KEGG: hypothetical protein.
       0.780
EUB97201.1
PFAM: NUDIX hydrolase; KEGG: mutT, MutT/nudix family protein; Belongs to the Nudix hydrolase family.
 
     0.597
ruvB
Holliday junction ATP-dependent DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.
       0.532
EUB96463.1
TIGRFAM: SPO1 DNA polymerase-related protein, phage SPO1 DNA polymerase-related protein, DNA metabolism protein, putative; PFAM: Domain of unknown function DUF4130, Uracil-DNA glycosylase superfamily; KEGG: hypothetical protein; SMART: Uracil-DNA glycosylase superfamily.
  
     0.530
EUB96462.1
KEGG: hypothetical protein; TIGRFAM: DNA modification/repair radical SAM protein, putative; SMART: Elongator protein 3/MiaB/NifB.
  
     0.525
EUB97881.1
KEGG: putative topoisomerase I; PFAM: DNA topoisomerase I catalytic core domain protein.
 
     0.522
EUB97197.1
TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; KEGG: Regulators of stationary/sporulation gene expression protein; SMART: SpoVT/AbrB domain-containing protein.
       0.518
EUB97198.1
PFAM: PilT protein domain protein; KEGG: hypothetical protein.
       0.518
EUB97200.1
PFAM: metallophosphoesterase; KEGG: phosphatase.
       0.490
EUB98997.1
PFAM: protein of unknown function DUF1206; KEGG: hypothetical protein.
  
     0.487
Your Current Organism:
Rhizobium sp. CF080
NCBI taxonomy Id: 1144310
Other names: R. sp. CF080
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.