STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUB96607.1Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator. (309 aa)    
Predicted Functional Partners:
EUB98220.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator.
  
     0.774
EUB96606.1
S-adenosylhomocysteine deaminase; KEGG: putative amidohydrolase; PFAM: amidohydrolase.
       0.773
EUB99931.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: putative transcriptional regulator, LysR family.
  
     0.773
EUB96833.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulatory protein.
  
     0.767
EUB98755.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: probabable transcriptional regulator.
  
     0.746
EUB98860.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: lysR, transcriptional regulator.
  
     0.744
EUB96610.1
KEGG: putative invasion protein.
 
    0.733
EUC00348.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator.
  
     0.728
EUB98581.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: Uncharacterized HTH-type transcriptional regulator HI1364 ORF2.
  
     0.700
EUB99310.1
Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator.
  
     0.699
Your Current Organism:
Rhizobium sp. CF080
NCBI taxonomy Id: 1144310
Other names: R. sp. CF080
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