STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUB95721.1PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: glutathione-dependent formaldehyde-activating GFA. (136 aa)    
Predicted Functional Partners:
EUB98435.1
PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: glutathione-dependent formaldehyde-activating protein.
  
     0.772
EUC01432.1
PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: glutathione-dependent formaldehyde-activating protein.
  
     0.767
EUB95158.1
PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: glutathione-dependent formaldehyde-activating GFA.
  
     0.745
EUB98394.1
PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: glutathione-dependent formaldehyde-activating protein.
  
     0.732
EUB96864.1
PFAM: glutathione-dependent formaldehyde-activating GFA; KEGG: glutathione-dependent formaldehyde-activating protein.
  
     0.690
EUB95497.1
KEGG: glutathione-dependent formaldehyde dehydrogenase; TIGRFAM: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES domain protein, Alcohol dehydrogenase zinc-binding domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.651
EUB96260.1
KEGG: dimethylglycine dehydrogenase; PFAM: FAD dependent oxidoreductase, glycine cleavage T protein (aminomethyl transferase), Glycine cleavage T-protein barrel; Belongs to the GcvT family.
  
  
  0.648
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
       0.611
EUB95719.1
PFAM: WD40-like beta Propeller containing protein; KEGG: tolB, tolB protein.
       0.598
EUB95722.1
TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: putative DAHP synthetase protein; PFAM: DAHP synthetase class II.
       0.512
Your Current Organism:
Rhizobium sp. CF080
NCBI taxonomy Id: 1144310
Other names: R. sp. CF080
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