STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUC00312.1KEGG: motA, flagellar motor protein; TIGRFAM: flagellar motor stator protein MotA; PFAM: MotA/TolQ/ExbB proton channel. (289 aa)    
Predicted Functional Partners:
EUC00284.1
PFAM: Motility protein B, N-terminal domain, OmpA/MotB domain protein; KEGG: motB, flagellar motor protein MotB.
 
 0.999
EUB97150.1
PFAM: OmpA/MotB domain protein; KEGG: Flagellar motor protein.
  
 0.997
EUC00648.1
PFAM: OmpA/MotB domain protein; KEGG: OmpA/MotB domain-containing protein.
  
 0.996
EUC00315.1
PFAM: Flagellar motor switch protein FliG, C-terminal; KEGG: fliG, flagellar motor switch protein G.
 
 
 0.991
EUC00313.1
PFAM: surface presentation of antigens (SPOA) protein; KEGG: fliM, flagellar motor switch protein.
 
 
 0.990
flgH
Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
  
 0.987
EUC00278.1
KEGG: flgK, flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein.
 
  
 0.985
EUC00314.1
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
  
 0.984
EUC00320.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.983
EUC00307.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
  
 0.982
Your Current Organism:
Rhizobium sp. CF080
NCBI taxonomy Id: 1144310
Other names: R. sp. CF080
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