STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUB99298.1SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oligopeptide/dipeptide ABC transporter ATP-binding protein; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; Belongs to the ABC transporter superfamily. (331 aa)    
Predicted Functional Partners:
EUB99296.1
PFAM: ABC-type transporter, integral membrane subunit; KEGG: appC, oligopeptide ABC transporter permease.
 
  0.865
EUB99297.1
SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: Oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein; Belongs to the ABC transporter superfamily.
 
  
 
0.846
EUB99295.1
PFAM: ABC-type transporter, integral membrane subunit; KEGG: gsiC4, glutathione ABC transporter permease GsiC.
  
 
  0.752
EUB99299.1
2,4-dienoyl-CoA reductase (NADPH); KEGG: NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain.
       0.718
EUB98907.1
Quaternary-amine-transporting ATPase, Nickel-transporting ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; KEGG: peptide ABC transporter ATPase/substrate-binding protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
   
 
 
0.607
EUB99294.1
PFAM: ABC-type transporter, periplasmic subunit; KEGG: h16_A2949, ABC transporter periplasmic protein.
  
 
  0.585
EUB99450.1
PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain; KEGG: oppC2, putative oligopeptide transport system permease protein oppC (ABC superfamily, membrane).
 
 
  0.580
EUB99082.1
SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oligopeptide/dipeptide ABC transporter ATPase; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; Belongs to the ABC transporter superfamily.
 
 
 
0.553
EUB96560.1
SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oligopeptide transport ATP-binding protein AppF 5; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; Belongs to the ABC transporter superfamily.
 
 
 
0.552
EUB99452.1
SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: peptide ABC transporter ATP-binding protein; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein; Belongs to the ABC transporter superfamily.
 
 
 
0.549
Your Current Organism:
Rhizobium sp. CF080
NCBI taxonomy Id: 1144310
Other names: R. sp. CF080
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