STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EUB98108.1KEGG: response regulator; PFAM: response regulator receiver; SMART: response regulator receiver. (135 aa)    
Predicted Functional Partners:
EUB96594.1
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, PAS fold-3 domain protein, histidine kinase A domain protein; KEGG: two component sensor kinase/response regulator hybrid; SMART: ATP-binding region ATPase domain protein, response regulator receiver, PAC repeat-containing protein, PAS domain containing protein, histidine kinase A domain protein.
 
 0.992
EUC00880.1
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, PAS fold domain protein, histidine kinase A domain protein, response regulator receiver; KEGG: fixL, two-component sensor histidine kinase; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein, response regulator receiver, histidine kinase A domain protein.
 
 0.992
EUB98599.1
KEGG: histidine kinase; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver.
 
 0.992
EUB98304.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, GAF domain protein, histidine kinase A domain protein, PAS fold-4 domain protein; KEGG: multi-sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein, PAS domain containing protein, GAF domain protein.
 
 0.992
EUB97909.1
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein; KEGG: PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region ATPase domain protein, PAS domain containing protein, histidine kinase A domain protein, PAC repeat-containing protein, response regulator receiver.
 
 0.991
EUB99884.1
KEGG: sensor histidine kinase; PFAM: response regulator receiver; SMART: response regulator receiver.
 
 0.990
EUB98600.1
KEGG: two-component sensor histidine kinase/response regulator hybrid protein; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein, histidine kinase HAMP region domain protein, GAF domain protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, response regulator receiver, GAF domain protein, histidine kinase HAMP region domain protein.
  
 0.989
EUB95161.1
PFAM: PAS fold-3 domain protein; KEGG: hypothetical protein.
 
 0.985
EUB98465.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, PAS fold-4 domain protein, histidine kinase A domain protein, GAF domain protein; KEGG: putative two component sensor kinase/response regulator; SMART: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein, PAS domain containing protein, GAF domain protein.
 
0.981
EUB96764.1
PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS fold-4 domain protein, response regulator receiver; KEGG: two component sensor kinase/response regulator hybrid; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein, response regulator receiver.
  
 0.977
Your Current Organism:
Rhizobium sp. CF080
NCBI taxonomy Id: 1144310
Other names: R. sp. CF080
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.