STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJL58416.1Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Bacterial transglutaminase-like N-terminal region, Transglutaminase-like superfamily. (290 aa)    
Predicted Functional Partners:
EJL52388.1
Hypothetical protein; PFAM: Bacterial domain of unknown function (DUF403), Domain of unknown function (DUF407), Domain of unknown function (DUF404).
 
  
 0.912
EJL58417.1
Transglutaminase-like enzyme, predicted cysteine protease; PFAM: Transglutaminase-like superfamily.
 
     0.894
EJL57146.1
Hypothetical protein; PFAM: Domain of unknown function (DUF404), Domain of unknown function (DUF407).
 
  
 0.825
EJL57145.1
Hypothetical protein; PFAM: Bacterial domain of unknown function (DUF403).
 
  
 0.812
EJL58415.1
Hypothetical protein.
       0.768
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.766
EJL57339.1
Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.
   
   0.632
surE
5''/3''-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
    
  0.617
EJL58414.1
Hypothetical protein.
       0.425
EJL54601.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2248).
 
     0.418
Your Current Organism:
Rhizobium sp. CF122
NCBI taxonomy Id: 1144312
Other names: R. sp. CF122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.