STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJL53152.1Kef-type K+ transport system, predicted NAD-binding component; PFAM: TrkA-N domain, Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family. (604 aa)    
Predicted Functional Partners:
EJL53151.1
Hypothetical protein.
       0.741
EJL51570.1
PFAM: TrkA-N domain, Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family.
 
  
0.635
EJL53175.1
Flagellar basal-body rod protein FlgF; PFAM: Domain of unknown function (DUF1078), Flagella basal body rod protein; TIGRFAM: flagellar basal-body rod protein FlgF, fagellar hook-basal body proteins.
    
   0.617
secD-2
Protein-export membrane protein, SecD/SecF family; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.
       0.609
EJL58514.1
Putative membrane protein; PFAM: SNARE associated Golgi protein.
  
    0.575
EJL56873.1
Putative membrane protein.
  
    0.575
EJL54674.1
Putative membrane protein; PFAM: SNARE associated Golgi protein.
  
    0.575
EJL53153.1
Hypothetical protein.
       0.554
EJL53149.1
Putative esterase; PFAM: Phospholipase/Carboxylesterase, Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily.
    
  0.516
EJL54209.1
Sulfate permease-like transporter, MFS superfamily; PFAM: Sulfate transporter family, STAS domain; TIGRFAM: high affinity sulphate transporter 1.
    
  0.507
Your Current Organism:
Rhizobium sp. CF122
NCBI taxonomy Id: 1144312
Other names: R. sp. CF122
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.