STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJL50335.1Putative permease; PFAM: EamA-like transporter family. (295 aa)    
Predicted Functional Partners:
bpt
Putative arginyl-tRNA:protein arginylyltransferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
       0.792
EJL51612.1
PFAM: Bacterial protein of unknown function (DUF937).
  
     0.511
EJL54661.1
Lysozyme M1 (1,4-beta-N-acetylmuramidase); PFAM: Glycosyl hydrolases family 25.
  
     0.493
EJL50337.1
Putative membrane protein/domain-containing protein; PFAM: RDD family.
       0.462
EJL57278.1
PFAM: Kazal-type serine protease inhibitor domain.
  
     0.444
EJL54925.1
PFAM: Acetyltransferase (GNAT) family.
  
     0.411
Your Current Organism:
Rhizobium sp. CF122
NCBI taxonomy Id: 1144312
Other names: R. sp. CF122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.