STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJL49117.1Hypothetical protein. (100 aa)    
Predicted Functional Partners:
EJL55693.1
Heme peroxidase family protein; PFAM: Animal haem peroxidase.
  
 
  0.891
EJL49870.1
Putative calcium-binding protein; PFAM: Hemolysin-type calcium-binding repeat (2 copies).
  
 
  0.891
EJL54205.1
Putative membrane protein; PFAM: Protein of unknown function (DUF3300).
 
 
 0.842
EJL57727.1
VCBS repeat-containing protein; PFAM: Bacterial pre-peptidase C-terminal domain, Proprotein convertase P-domain; TIGRFAM: T1SS-143 repeat domain, type 1 secretion C-terminal target domain (VC_A0849 subclass), VCBS repeat.
   
 0.816
EJL56618.1
Hypothetical protein.
   
 0.816
EJL55724.1
Hypothetical protein.
   
 0.816
EJL53194.1
Hypothetical protein.
   
 0.816
EJL50971.1
Hypothetical protein.
   
 0.816
EJL50951.1
PFAM: Predicted integral membrane protein (DUF2282).
   
    0.798
EJL56096.1
PFAM: Type IV secretory pathway, VirB3-like protein.
   
    0.797
Your Current Organism:
Rhizobium sp. CF122
NCBI taxonomy Id: 1144312
Other names: R. sp. CF122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.