STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJL63520.1Putative redox protein, regulator of disulfide bond formation; PFAM: OsmC-like protein. (133 aa)    
Predicted Functional Partners:
EJL63521.1
Putative glycosyl hydrolase; PFAM: Receptor family ligand binding region, LysM domain.
 
     0.829
EJL62269.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit; PFAM: Dehydrogenase E1 component, Transketolase, C-terminal domain, Transketolase, pyrimidine binding domain.
    
  0.653
EJL60381.1
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase component beta subunit; PFAM: Dehydrogenase E1 component, Transketolase, C-terminal domain, Transketolase, pyrimidine binding domain.
    
  0.653
EJL63522.1
Putative glycosyl hydrolase; PFAM: LysM domain.
       0.613
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
       0.568
EJL63519.1
Hypothetical protein.
  
    0.566
Your Current Organism:
Flavobacterium sp. CF136
NCBI taxonomy Id: 1144313
Other names: F. sp. CF136
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.