STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJL82297.1Hypothetical protein. (315 aa)    
Predicted Functional Partners:
EJL92050.1
Ankyrin repeat-containing protein; PFAM: Ankyrin repeat.
 
 
 0.899
EJL91023.1
Ankyrin repeat-containing protein.
   
 0.876
EJL81218.1
Ankyrin repeat-containing protein.
   
 0.876
EJL88365.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, Response regulator receiver domain, His Kinase A (phosphoacceptor) domain.
    
 0.866
EJL88641.1
PFAM: Protein of unknown function (DUF3108).
  
  
 0.836
EJL91289.1
Signal transduction histidine kinase, nitrate/nitrite-specific; PFAM: HAMP domain, GAF domain, His Kinase A (phosphoacceptor) domain.
 
  
 0.823
EJL84151.1
TPR repeat-containing protein; PFAM: Glycosyltransferase family 9 (heptosyltransferase), Tetratricopeptide repeat.
   
 0.821
EJL91285.1
PFAM: HAMP domain, Response regulator receiver domain, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, GAF domain, His Kinase A (phosphoacceptor) domain.
 
  
 0.815
EJL94424.1
PAS domain S-box; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, Response regulator receiver domain, His Kinase A (phosphoacceptor) domain, Hpt domain, PAS fold; TIGRFAM: PAS domain S-box.
    
 0.813
mutS
DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.
     
 0.808
Your Current Organism:
Herbaspirillum sp. CF444
NCBI taxonomy Id: 1144319
Other names: H. sp. CF444
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.