STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJN03355.1ABC-type transport system involved in resistance to organic solvents, auxiliary component; PFAM: Toluene tolerance, Ttg2. (211 aa)    
Predicted Functional Partners:
EJN03353.1
ABC-type transport system involved in resistance to organic solvents, periplasmic component; PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein.
 
 0.997
EJN03356.1
Putative NTP binding protein (contains STAS domain); PFAM: STAS domain.
  
 
 0.976
EJN03354.1
PFAM: VacJ like lipoprotein.
 
 
 
 0.971
EJN03352.1
Putative integral membrane protein; PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein.
 
 
 0.940
EJN03351.1
ABC-type transport system involved in resistance to organic solvents, ATPase component; PFAM: ABC transporter.
 
 
 0.936
EJN00954.1
Acetyltransferase, ribosomal protein N-acetylase; PFAM: Acetyltransferase (GNAT) family.
    
   0.719
EJN03357.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
  
 
  0.682
EJN00513.1
PFAM: Outer membrane protein (OmpH-like); Belongs to the skp family.
  
   
 0.644
lptD
Organic solvent tolerance protein OstA; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.
  
   
 0.572
bamD
Beta-barrel assembly machine subunit BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
  
   
 0.570
Your Current Organism:
Herbaspirillum sp. YR522
NCBI taxonomy Id: 1144342
Other names: H. sp. YR522
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.