STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EJN04868.1PFAM: Bacterial regulatory proteins, tetR family. (208 aa)    
Predicted Functional Partners:
EJN04869.1
Putative NADPH-quinone reductase (modulator of drug activity B); PFAM: Flavodoxin-like fold.
 
     0.740
EJN05270.1
Short-chain dehydrogenase of unknown substrate specificity; PFAM: Saccharopine dehydrogenase.
 
     0.639
EJN04355.1
Hypothetical protein.
 
     0.609
EJN03620.1
Hypothetical protein.
  
     0.524
EJN05273.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.461
EJN05250.1
PFAM: AIG2-like family.
  
     0.421
EJM99408.1
PFAM: Histidine kinase, Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase, Response regulator receiver domain.
  
 
   0.421
EJN04870.1
NADH dehydrogenase, FAD-containing subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase.
    
  0.417
Your Current Organism:
Phyllobacterium sp. YR531
NCBI taxonomy Id: 1144343
Other names: P. sp. YR531
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.